BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026A11LP1|AL428485
(837 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1022 1624 0.0
>3x_Contig1022
Length = 4856
Score = 1624 bits (816), Expect = 0.0
Identities = 829/837 (99%)
Strand = Plus / Plus
Query: 1 gatcaaatgttgttattttttaaattactctatacaaaaatgcttggtttagaaagtcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1938 gatcaaatgttgttattttttaaattactctatacaaaaatgcttggtttagaaagtcca 1997
Query: 61 tgctagatatgcagtattatataggagaaatatgagactcctgaagagagccggactttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1998 tgctagatatgcagtattatataggagaaatatgagactcctgaagagagccggactttt 2057
Query: 121 tttttttggcctcactttaaatataagaggcgaacttatttagccttgttatattcattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2058 tttttttggcctcactttaaatataagaggcgaacttatttagccttgttatattcattc 2117
Query: 181 agcttaccgatgaaccacaatgagcttaggtaacttaaagatccaaatgctgtccagcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2118 agcttaccgatgaaccacaatgagcttaggtaacttaaagatccaaatgctgtccagcag 2177
Query: 241 agaatgttgaataacgtactataacagacaaataggaaagatgagatgaaatctctgtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2178 agaatgttgaataacgtactataacagacaaataggaaagatgagatgaaatctctgtat 2237
Query: 301 ctggcaacaaaaatcaaatacaaaatagagtacgcttccatataccatgcaactgcacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2238 ctggcaacaaaaatcaaatacaaaatagagtacgcttccatataccatgcaactgcacca 2297
Query: 361 cccatatgaaatgccttccatctccatgaatgacatgcttctagaacccttcctataacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2298 cccatatgaaatgccttccatctccatgaatgacatgcttctagaacccttcctataacg 2357
Query: 421 ttgtcccatttganattcaaagaatcattaccatagtttagatgaatgtdacaaccaata 480
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2358 ttgtcccatttgaaattcaaagaatcattaccatagtttagatgaatgtaacaaccaata 2417
Query: 481 atgggtagaaggcagatacatatgcaaacgataacaatattactcaaaagggatccgtat 540
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2418 atggatagaaggcagatacatatgcaaacgataacaatattactcaaaaggaatccgtat 2477
Query: 541 aagtdatacagagtagtcttttgtagccaaagtgatttgtaagcvaataacaactccacg 600
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2478 aagtaatacagagtagtcttttgtagccaaagtgatttgtaagcaaataacaactccacg 2537
Query: 601 tatattagagcaaatggaataagtccaaaggtgagagtgatcgcaataggattttttaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2538 tatattagagcaaatggaataagtccaaaggtgagagtgatcgcaataggattttttaag 2597
Query: 661 acgaacggaatagagttcttactctcaacgtacaaaggcctagtgtcatgtttgttcact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2598 acgaacggaatagagttcttactctcaacgtacaaaggcctagtgtcatgtttgttcact 2657
Query: 721 tctgccaatgcaaagctattaagcaaagtatttgtggrgttaacttttaaaaacctatcg 780
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2658 tctgccaatgcaaagctattaagcaaagtatttgtggagttaacttttaaaaacctatcg 2717
Query: 781 gcacatttcccaccaatgattgatattggracgcaaacaatgaaataagcaccaaat 837
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2718 gcacatttcccaccaatgattgatattggaacgcaaacaatgaaataagcaccaaat 2774
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,166
Number of Sequences: 1807
Number of extensions: 11166
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 837
length of database: 10,358,551
effective HSP length: 16
effective length of query: 821
effective length of database: 10,329,639
effective search space: 8480633619
effective search space used: 8480633619
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)